[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 44 items for (author: lopez & aj)

PDB-8phe:
ACAD9-WT in complex with ECSIT-CTER
Method: single particle / : McGregor L, Acajjaoui S, Desfosses A, Saidi M, Bacia-Verloop M, Schwarz JJ, Juyoux P, Von Velsen J, Bowler MW, McCarthy A, Kandiah E, Gutsche I, Soler-Lopez M

PDB-8phf:
Cryo-EM structure of human ACAD9-S191A
Method: single particle / : McGregor L, Acajjaoui S, Desfosses A, Saidi M, Bacia-Verloop M, Schwarz JJ, Juyoux P, Von Velsen J, Bowler MW, McCarthy A, Kandiah E, Gutsche I, Soler-Lopez M

EMDB-16555:
Mouse serotonin 5-HT3A receptor in complex with PZ-1922
Method: single particle / : Lopez-Sanchez U, Nury H

EMDB-16557:
Mouse serotonin 5-HT3A receptor in complex with PZ-1939
Method: single particle / : Lopez-Sanchez U, Nury H

PDB-8cc6:
Mouse serotonin 5-HT3A receptor in complex with PZ-1922
Method: single particle / : Lopez-Sanchez U, Nury H

PDB-8cc7:
Mouse serotonin 5-HT3A receptor in complex with PZ-1939
Method: single particle / : Lopez-Sanchez U, Nury H

EMDB-26786:
CPV Affinity Purified Polyclonal Fab A Site Fab
Method: single particle / : Hartmann SR, Hafenstein SL, Charnesky AJ

EMDB-26787:
CPV Affinity Purified Polyclonal Fab B Site Fab
Method: single particle / : Hartmann SR, Hafenstein SL, Charnesky AJ

EMDB-26788:
CPV Total-Fab Polyclonal A Site Fab
Method: single particle / : Hartmann SR, Hafenstein SL, Charnesky AJ

EMDB-26789:
CPV Total-Fab Polyclonal B Site Fab (1 of 2)
Method: single particle / : Hartmann SR, Hafenstein SL, Charnesky AJ

EMDB-26790:
CPV Total-Fab Polyclonal B Site Fab (2 of 2)
Method: single particle / : Hartmann SR, Hafenstein SL, Charnesky AJ

EMDB-33650:
SARS-CoV-2 spike glycoprotein trimer complexed with Fab fragment of anti-RBD antibody E7
Method: single particle / : Chia WN, Tan CW, Tan AWK, Young B, Starr TN, Lopez E, Fibriansah G, Barr J, Cheng S, Yeoh AYY, Yap WC, Lim BL, Ng TS, Sia WR, Zhu F, Chen S, Zhang J, Greaney AJ, Chen M, Au GG, Paradkar P, Peiris M, Chung AW, Bloom JD, Lye D, Lok SM, Wang LF

EMDB-33651:
SARS-CoV-2 spike glycoprotein trimer complexed with Fab fragment of anti-RBD antibody E7 (focused refinement on Fab-RBD interface)
Method: single particle / : Chia WN, Tan CW, Tan AWK, Young B, Starr TN, Lopez E, Fibriansah G, Barr J, Cheng S, Yeoh AYY, Yap WC, Lim BL, Ng TS, Sia WR, Zhu F, Chen S, Zhang J, Greaney AJ, Chen M, Au GG, Paradkar P, Peiris M, Chung AW, Bloom JD, Lye D, Lok SM, Wang LF

EMDB-14438:
VAR2 complex with PAM1.4
Method: single particle / : Raghavan SSR, Wang KT

EMDB-14446:
VAR2CSA APO
Method: single particle / : Raghavan SSR, Wang KT

PDB-7z12:
VAR2 complex with PAM1.4
Method: single particle / : Raghavan SSR, Wang KT

PDB-7z1h:
VAR2CSA APO
Method: single particle / : Raghavan SSR, Wang KT

EMDB-24075:
Cryo-EM structure of NTD-directed neutralizing antibody LP5 Fab in complex with SARS-CoV-2 S2P spike
Method: single particle / : Reddem ER, Casner RG, Shapiro L

EMDB-12274:
EM structure of SARS-CoV-2 Spike glycoprotein in complex with COVOX-40 Fab
Method: single particle / : Duyvesteyn HME, Zhao Y, Ren J, Stuart D

EMDB-12275:
EM structure of SARS-CoV-2 Spike glycoprotein in complex with COVOX-88 Fab
Method: single particle / : Duyvesteyn HME, Zhao Y, Ren J, Stuart D

EMDB-12276:
EM structure of SARS-CoV-2 Spike glycoprotein in complex with COVOX-150 Fab
Method: single particle / : Duyvesteyn HME, Zhao Y, Ren J, Stuart D

EMDB-12277:
EM structure of SARS-CoV-2 Spike glycoprotein in complex with COVOX-40 Fab
Method: single particle / : Duyvesteyn HME, Zhao Y, Ren J, Stuart D

EMDB-12278:
EM structure of SARS-CoV-2 Spike glycoprotein in complex with COVOX-316 Fab
Method: single particle / : Duyvesteyn HME, Zhao Y, Ren J, Stuart D

EMDB-12279:
EM structure of SARS-CoV-2 Spike glycoprotein in complex with COVOX-384 Fab
Method: single particle / : Duyvesteyn HME, Zhao Y, Ren J, Stuart D

EMDB-12280:
EM structure of SARS-CoV-2 Spike glycoprotein (one RBD up) in complex with COVOX-253H55L Fab
Method: single particle / : Duyvesteyn HME, Zhao Y, Ren J, Stuart D

EMDB-12281:
EM structure of SARS-CoV-2 Spike glycoprotein (all RBD down) in complex with COVOX-253H55L Fab
Method: single particle / : Duyvesteyn HME, Zhao Y, Ren J, Stuart D

EMDB-12282:
EM structure of SARS-CoV-2 Spike glycoprotein in complex with COVOX-253H165L Fab
Method: single particle / : Duyvesteyn HME, Zhao Y, Ren J, Stuart D

EMDB-12283:
EM structure of SARS-CoV-2 Spike glycoprotein (all RBD down) in complex with COVOX-159
Method: single particle / : Duyvesteyn HME, Zhao Y, Ren J, Stuart D

EMDB-12284:
EM structure of SARS-CoV-2 Spike glycoprotein (one RBD up) in complex with COVOX-159
Method: single particle / : Duyvesteyn HME, Zhao Y, Ren J, Stuart D

EMDB-23016:
Cryo-EM structure of prefusion SARS-CoV-2 spike glycoprotein in complex with 910-30 Fab
Method: single particle / : Cerutti G, Shapiro L

EMDB-23039:
Cryo-EM map of SARS-CoV-2 spike glycoprotein in complex with 910-30 Fab (disrupted form)
Method: single particle / : Cerutti G, Shapiro L

EMDB-10587:
Structure of Plasmodium Actin1 filament
Method: helical / : Vahokoski J, Calder LJ, Lopez AJ, Rosenthal PB, Kursula I

EMDB-10590:
Structure of PfMyoA decorated Plasmodium Act1 filament
Method: helical / : Vahokoski J, Calder LJ, Lopez AJ, Rosenthal PB, Kursula I

EMDB-10588:
Plasmodium falciparum Act2 filament structure
Method: helical / : Vahokoski J, Calder LJ, Lopez AJ, Rosenthal PB, Kursula I

EMDB-10589:
Filament structure of PfAct2
Method: helical / : Vahokoski J, Calder LJ, Lopez AJ, Rosenthal PB, Kursula I

EMDB-12055:
ACAD9-ECSIT-CTD (ACAD9 core)
Method: single particle / : Giachin G, Jessop M, Soler-Lopez M, Gutsche I

EMDB-22829:
Human Tom70 in complex with SARS CoV2 Orf9b
Method: single particle / : QCRG Structural Biology Consortium

PDB-7kdt:
Human Tom70 in complex with SARS CoV2 Orf9b
Method: single particle / : QCRG Structural Biology Consortium

EMDB-10100:
Legionella pneumophila SidJ-Human calmodulin complex
Method: single particle / : Pfleiderer MM, Galej WP, Adams M, Bhogaraju S

PDB-6s5t:
Legionella pneumophila SidJ-Human calmodulin complex
Method: single particle / : Bhogaraju S, Galej WP, Pfleiderer MM, Adams M

EMDB-1099:
Architecture of CRM1/Exportin1 suggests how cooperativity is achieved during formation of a nuclear export complex.
Method: single particle / : Petosa C

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more